Dataset

Converters

chainer_chemistry.dataset.converters.concat_mols

Indexers

chainer_chemistry.dataset.indexer.BaseIndexer
chainer_chemistry.dataset.indexer.BaseFeatureIndexer
chainer_chemistry.dataset.indexers.NumpyTupleDatasetFeatureIndexer

Parsers

chainer_chemistry.dataset.parsers.BaseParser
chainer_chemistry.dataset.parsers.CSVFileParser
chainer_chemistry.dataset.parsers.SDFFileParser
chainer_chemistry.dataset.parsers.DataFrameParser
chainer_chemistry.dataset.parsers.SmilesParser

Preprocessors

Base preprocessors

chainer_chemistry.dataset.preprocessors.BasePreprocessor
chainer_chemistry.dataset.preprocessors.MolPreprocessor

Concrete preprocessors

chainer_chemistry.dataset.preprocessors.AtomicNumberPreprocessor
chainer_chemistry.dataset.preprocessors.ECFPPreprocessor
chainer_chemistry.dataset.preprocessors.GGNNPreprocessor
chainer_chemistry.dataset.preprocessors.NFPPreprocessor
chainer_chemistry.dataset.preprocessors.SchNetPreprocessor
chainer_chemistry.dataset.preprocessors.WeaveNetPreprocessor

Utilities

chainer_chemistry.dataset.preprocessors.MolFeatureExtractionError
chainer_chemistry.dataset.preprocessors.type_check_num_atoms
chainer_chemistry.dataset.preprocessors.construct_atomic_number_array
chainer_chemistry.dataset.preprocessors.construct_adj_matrix

Splitters

chainer_chemistry.dataset.splitters.RandomSplitter
chainer_chemistry.dataset.splitters.StratifiedSplitter
chainer_chemistry.dataset.splitters.ScaffoldSplitter